| 2025 | Perry, Logan J and Ratcliff, Gavin E and Mayo, Arthur and Perez, Blanca E and Wahba, Larissa Rays and Nikhil, KL and Lenzen, William C and Li, Yangyuan and Mar, Jordan and Farhy-Tselnicker, Isabella and others: A circadian behavioral analysis suite for real-time classification of daily rhythms in complex behaviors. In: Cell Reports Methods, 5, 2025, |
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| 2025 | Nikhil, KL and Bates, Keenan and Sapiro, Elizabeth and Amme, Jacob L and McCarthy, Ronald and Speck, Sarah and Vasireddy, Varun and Roberts, Ethan and Martin-Fairey, Carmel A and Dom{\'\i}nguez-Romero, Miguel-E and others: Fetoplacental circadian rhythms develop and then synchronize to the mother in utero. In: bioRxiv, 2025, 2025--12 |
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| 2025 | Nikhil, KL and Singhal, Bharat and Granados-Fuentes, Daniel and Li, Jr-Shin and Kiss, Istv{\'a}n Z and Herzog, Erik D: The inferred functional connectome underlying circadian synchronization in the mouse suprachiasmatic nucleus. In: Proceedings of the National Academy of Sciences, 122, 2025, e2520674122 |
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| 2025 | Singhal, Bharat and Ocampo-Espindola, Jorge Luis and Nikhil, KL and Herzog, Erik D and Kiss, Istv{\'a}n Z and Li, Jr-Shin: Uncertainty Quantification of Network Inference with Data Sufficiency. In: IEEE Transactions on Network Science and Engineering, 2025, |
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| 2024 | Nikhil, KL and Singhal, Bharat and Granados-Fuentes, Daniel and Li, Jr-Shin and Kiss, Istv{\'a}n Z and Herzog, Erik D: The Functional Connectome Mediating Circadian Synchrony in the Suprachiasmatic Nucleus. In: bioRxiv, 2024, |
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| 2023 | Bates, Keenan and Sapiro, Elizabeth and Amme, Jacob L and McCarthy, Ronald and Nikhil, KL and Speck, Sarah and Vasireddy, Varun and Roberts, Ethan and Martin-Fairey, Carmel and Dom{\'\i}nguez-Romero, Miguel-E and others: Fetal daily rhythms develop during pregnancy and entrain to the maternal circadian system. In: bioRxiv, 2023, 2023--06 |
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| 2023 | Ocampo-Espindola, Jorge Luis and Nikhil, KL and Li, Jr-Shin and Herzog, Erik D and Kiss, Istv{\'a}n Z: Synchronization, clustering, and weak chimeras in a densely coupled transcription-based oscillator model for split circadian rhythms. In: Chaos: An Interdisciplinary Journal of Nonlinear Science, 33, 2023, |
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| 2020 | Nikhil, KL and Korge, Sandra and Kramer, Achim: Heritable gene expression variability and stochasticity govern clonal heterogeneity in circadian period. In: PLoS Biology, 18, 2020, e3000792 |
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| 2017 | Shindey, Radhika and Varma, Vishwanath and Nikhil, KL and Sharma, Vijay Kumar: Evolution of circadian rhythms in Drosophila melanogaster populations reared in constant light and dark regimes for over 330 generations. In: Chronobiology International, 34, 2017, 537--550 |
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| 2017 | Nikhil, KL and Sharma, Vijay Kumar: On the origin and implications of circadian timekeeping: An evolutionary perspective. Biological timekeeping: Clocks, rhythms and behaviour. Springer India New Delhi, 2017. 81--129 |
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| 2016 | Nikhil, KL and Vaze, Koustubh M and Ratna, Karatgi and Sharma, Vijay Kumar: Circadian clock properties of fruit flies Drosophila melanogaster exhibiting early and late emergence chronotypes. In: Chronobiology International, 33, 2016, 22--38 |
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| 2016 | Shindey, Radhika and Varma, Vishwanath and Nikhil, KL and Sharma, Vijay Kumar: Evolution of robust circadian clocks in Drosophila melanogaster populations reared in constant dark for over 330 generations. In: The Science of Nature, 103, 2016, 74 |
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| 2016 | Nikhil, KL and Ratna, Karatgi and Sharma, Vijay Kumar: Life-history traits of Drosophila melanogaster populations exhibiting early and late eclosion chronotypes. In: BMC Evolutionary Biology, 16, 2016, 46 |
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| 2016 | Nikhil, Kunjalli Lokesh and Abhilash, Lakshman and Sharma, Vijay Kumar: Molecular correlates of circadian clocks in fruit fly Drosophila melanogaster populations exhibiting early and late emergence chronotypes. In: Journal of biological rhythms, 31, 2016, 125--141 |
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| 2015 | Nikhil, KL and Vaze, Koustubh M and Sharma, Vijay Kumar: Late emergence chronotypes of fruit flies Drosophila melanogaster exhibit higher accuracy of entrainment. In: Chronobiology International, 32, 2015, 1477--1485 |
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| 2014 | Vaze, Koustubh M and Nikhil, KL and Sharma, Vijay Kumar: Circadian rhythms: 4. Why do living organisms have them?. In: Resonance, 19, 2014, 175--189 |
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| 2014 | Nikhil, KL and Goirik, Gupta and Ratna, Karatgi and Sharma, Vijay Kumar: Role of temperature in mediating morning and evening emergence chronotypes in fruit flies Drosophila melanogaster. In: Journal of Biological Rhythms, 29, 2014, 427--441 |
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| 2013 | Nikhil, KL and Sharma, Vijay Kumar: Circadian rhythms: 2. The underlying molecular mechanisms. In: Resonance, 18, 2013, 832--844 |
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| 2013 | Vaze, KM and Nikhil, KL and Sharma, Vijay Kumar: Genetic architecture underlying morning and evening circadian phenotypes in fruit flies Drosophila melanogaster. In: Heredity, 111, 2013, 265--274 |
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| 2012 | Vaze, Koustubh M and KL, Nikhil and Sharma, Vijay Kumar: Early-and late-emerging Drosophila melanogaster fruit flies differ in their sensitivity to light during morning and evening. In: Chronobiology International, 29, 2012, 674--682 |
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