Dr. Mark Pepin

Profile

Academic positionPost Doc
Research fieldsCardiology, Angiology,Developmental Biology
KeywordsEpigenetics, Histone Modification, Cardio-Oncology, Heart Failure, CamKII
Honours and awards

2020: Featured Graduate Researcher, UAB School of Medicine

2020: Summa Cum Laude, UAB School of Medicine

2019: "Samuel Barker" Award for Excellence in Graduate Studies

2019: Valedictorian, UAB Graduate Studies

2019: "William Stanley" Early Investigator Award

2018: NIH NHLBI F30 Pre-doctoral Research Grant

2017: "William Featheringill" Young Investigator Award

Current contact address

CountryUnited States of America
CityBirmingham
InstitutionUniversity of Alabama at Birmingham
InstituteSchool of Medicine

Host during sponsorship

Prof. Dr. med. Johannes BacksAbteilung Molekulare Kardiologie und Epigenetik, Ruprecht-Karls-Universität Heidelberg, Heidelberg
Start of initial sponsorship01/12/2020

Programme(s)

2020Humboldt Research Fellowship Programme for Postdocs

Publications (partial selection)

2024Infante, Teresa and Pepin, Mark E and Ruocco, Antonio and Trama, Ugo and Mauro, Ciro and Napoli, Claudio: CDK5R1, GSE1, HSPG2 and WDFY3 as indirect epigenetic-sensitive genes in atrial fibrillation. In: European Journal of Clinical Investigation, 54, 2024, e14135
2024Benincasa, Giuditta and Pepin, Mark E and Russo, Vincenzo and Cacciatore, Francesco and D’Alto, Michele and Argiento, Paola and Romeo, Emanuele and Chiappetti, Rosaria and Laezza, Nunzia and Wende, Adam R and others: High-resolution DNA methylation changes reveal biomarkers of heart failure with preserved ejection fraction versus reduced ejection fraction. In: Basic Research in Cardiology, 2024, 1--15
2024Pepin, Mark E and Gupta, Rajat M: The role of endothelial cells in atherosclerosis: insights from genetic association studies. In: The American Journal of Pathology, 194, 2024, 499--509
2023Lanzer, Jan D and Valdeolivas, Alberto and Pepin, Mark and Hund, Hauke and Backs, Johannes and Frey, Norbert and Friederich, Hans-Christoph and Schultz, Jobst-Hendrik and Saez-Rodriguez, Julio and Levinson, Rebecca T: A network medicine approach to study comorbidities in heart failure with preserved ejection fraction. In: BMC medicine, 21, 2023, 267
2023Pepin, Mark E and Konrad, Philipp and Nazir, Sumra and Dewenter, Matthias and Backs, Johannes: Abstract P2076: Disrupting Nicotinamide Nucleotide Transhydrogenase Prevents Cardiometabolic Heart Failure With Preserved Ejection In Mice.. In: Circulation Research, 133, 2023, AP2076--AP2076
2023Benincasa, G and Pepin, ME and Cacciatore, F and Russo, V and D'alto, M and Argiento, P and Romeo, E and Chiappetti, R and Laezza, N and Coscioni, E and others: DNA methylation profiling of circulating CD4+ T cells and network analysis reveal that JUNB, SETD7, and MEF2D genes predict patients with heart failure preserved vs. reduced ejection fraction. In: European Heart Journal, 44, 2023, ehad655--738
2023Pepin, Mark E and Konrad, Philipp and Nazir, Sumra and Dewenter, Matthias and Backs, Johannes: Disrupting Nicotinamide Nucleotide Transhydrogenase Prevents Cardiometabolic Heart Failure With Preserved Ejection In Mice.. CIRCULATION RESEARCH. 2023.
2023Pepin, Mark E and Nazir, Sumra and Konrad, Philipp JM and Schreiter, Friederike and Dewenter, Matthias and Backs, Johannes: Genetic Loss of Nicotinamide Nucleotide Transhydrogenase Prevents from Cardiometabolic Heart Failure with Preserved Ejection Fraction. In: bioRxiv, 2023, 2023--04
2023Oeing, Christian U and Pepin, Mark E and Saul, Kerstin B and Agircan, Ay{\c{c}}a Seyhan and Assenov, Yassen and Merkel, Tobias S and Sedaghat-Hamedani, Farbod and Weis, Tanja and Meder, Benjamin and Guan, Kaomei and others: Indirect epigenetic testing identifies a diagnostic signature of cardiomyocyte DNA methylation in heart failure. In: Basic Research in Cardiology, 118, 2023, 9
2023Infante, T and Pepin, ME and Ruocco, A and Mauro, C and Napoli, C: Integrated epigenomic and network analysis identifies novel DNA methylation signature in atrial fibrillation. In: European Heart Journal, 44, 2023, ehad655--409
2023Pepin, Mark E and Vellari, SK and Atri, DS and Reddy, Ankith and Sias-Garcia, Oscar and Hamel, Andrew R and Billaud, Marie and Lee-Kim, Vivian and Segre, Ayellet and Gupta, Rajat: Integrative Analysis of Single-Cell Transcriptomics and Polygenic Risk Scores Uncovers Vascular Smooth Muscle Cell Heterogeneity in Human Aortic Aneurisms. In: Circulation, 148, 2023, A11993--A11993
2023Pepin, ME and Kamal, Y and Reisman, BJ and Rockman, ME and Waller, JP: Making the match and breaking it: values, perceptions, and obstacles of trainees applying into physician-scientist training programs. In: BMC Medical Education, 23, 2023, 763
2022Souder, Jaclyn P and Pepin, Mark E and Seay, Randy L and Lorenz, Robin G and Geisler, William M and Yacoubian, Talene: A novel curricular framework to develop grant writing skills among MD--PhD students. In: Journal of Clinical and Translational Science, 6, 2022, e54
2022Bakshi, Sayan and Potter, Luke and Pepin, Mark and Ha, Chae-myeong and Wende, Adam R: Abstract P3099: Identification Of Hub Genes And Construction Of Protein-protein Interaction (PPI) Network Clusters Define Racially Distinct Signatures Of Ischemic Heart Failure. In: Circulation Research, 131, 2022, AP3099--AP3099
2022Saadatmand, Alireza and Pepin, Mark and Haberkorn, Uwe and Okun, Jürgen and Schlicker, Lisa and Schulze, Almut and Backs, Johannes: CaMKII regulates cardiac metabolic substrate switching during heart failure. In: Journal of Molecular and Cellular Cardiology, 173, 2022, S189
2022Lennermann, David C and Pepin, Mark E and Grosch, Markus and Konrad, Laura and Kemmling, Elena and Hartmann, Joshua and Nolte, Janica L and Clauder-Münster, Sandra and Kayvanpour, Elham and Sedaghat-Hamedani, Farbod and others: Deep phenotyping of two preclinical mouse models and a cohort of RBM20 mutation carriers reveals no sex-dependent disease severity in RBM20 cardiomyopathy. In: American Journal of Physiology-Heart and Circulatory Physiology, 323, 2022, H1296--H1310
2022Duran, Javier and Stolp, Bettina and Becker, Jonas and Dewenter, Matthias and Pepin, Mark and Ambiel, Ina and Grimm, Dirk and Fackler, Oliver and Backs, Johannes: Development of a mouse model for Sars-Cov-2 studies in the heart. In: Journal of Molecular and Cellular Cardiology, 173, 2022, 96
2022Pepin, Mark E and Souder, J Paige and Weaver, Alice N and Lorenz, Robin G and Yacoubian, Talene and Seay, Randy L: Fostering a diverse regional community of physician-scientist trainees. In: Journal of the National Medical Association, 114, 2022, 251--257
2022Bakshi, Sayan and Potter, Luke and Pepin, Mark and Ha, Chae-myeong and Wende, Adam R: Identification Of Hub Genes And Construction Of Proteinprotein Interaction (PPI) Network Clusters Define Racially Distinct Signatures Of Ischemic Heart Failure. CIRCULATION RESEARCH. 2022.
2021Pepin, Mark E and Saca, Eyad and Kwon, Soo Y and May, Jori: CASE REPORT: A case of “smoldering” immune-mediated thrombotic thrombocytopenic purpura manifesting as recurrent cardioembolic stroke.. In: Clinical Case Reports, 9, 2021,
2021Bakshi, Sayan and Pepin, Mark E and Ha, Chae-Myeong and Potter, Luke and Wende, Adam R: Combined Methylomics and Transcriptomics Identifies a Race-Specific Signature of Ischemic Heart Failure in Atrial Natriuretic Peptide Gene Regulation. In: Circulation, 144, 2021, A10692--A10692
2021Justin M. Quiles, Mark E. Pepin, Sini Sunny, Sandeep B. Shelar, Anil K. Challa, Brian Dalley, John R. Hoidal, Steven M. Pogwizd, Adam R. Wende \& Namakkal S. Rajasekaran: Identification of Nrf2-responsive microRNA networks as putative mediators of myocardial reductive stress. In: Scientific Reports, 11, 2021, 12
2021Pepin, Mark E and Ha, Chae-Myeong and Potter, Luke A and Bakshi, Sayan and Barchue, Joseph P and Asaad, Ayman Haj and Pogwizd, Steven M and Pamboukian, Salpy V and Hidalgo, Bertha A and Vickers, Selwyn M and others: Racial Differences in Cardiovascular and Cerebrovascular Physiology: Racial and socioeconomic disparity associates with differences in cardiac DNA methylation among men with end-stage heart failure. In: American Journal of Physiology-Heart and Circulatory Physiology, 320, 2021, H2066
2021Saadatmand, Alireza and Pepin, Mark E and Dewenter, Matthias and Haberkorn, Uwe and Backs, Johannes: The $\delta$C Isoform of Ca2+/Calmodulin-Dependent Protein Kinase II (camk2) Regulates Cardiac Metabolic Substrate Switching in Mice. In: Circulation, 144, 2021, A11062--A11062
2021Pepin, M and Ha, CM and Potter, LA and Bakshi, S and Barchue, J and Pogwizd, SM and Pamboukian, SV and Hidalgo, B and Wende, AR: The cardiac epigenome encodes racial and socioeconomic differences among patients with end-stage heart failure. EUROPEAN JOURNAL OF HEART FAILURE. 2021. 60--60
2021Pepin, Mark E and Schiano, Concetta and Miceli, Marco and Benincasa, Giuditta and Mansueto, Gelsomina and Grimaldi, Vincenzo and Soricelli, Andrea and Wende, Adam R and Napoli, Claudio: The human aortic endothelium undergoes dose-dependent DNA methylation in response to transient hyperglycemia. In: Experimental cell research, 400, 2021, 112485
2020Pepin, Mark E and Infante, Teresa and Benincasa, Giuditta and Schiano, Concetta and Miceli, Marco and Ceccarelli, Simona and Megiorni, Francesca and Anastasiadou, Eleni and Della Valle, Giovanni and Fatone, Gerardo and others: Differential DNA methylation encodes proliferation and senescence programs in human adipose-derived mesenchymal stem cells. In: Frontiers in Genetics, 11, 2020, 346
2020Brahma, Manoja K and Ha, Chae-Myeong and Pepin, Mark E and Mia, Sobuj and Sun, Zhihuan and Chatham, John C and Habegger, Kirk M and Abel, Evan Dale and Paterson, Andrew J and Young, Martin E and others: Increased glucose availability attenuates myocardial ketone body utilization. In: Journal of the American Heart Association, 9, 2020, e013039
2020Wende, Adam R and Schell, John C and Ha, Chae-Myeong and Pepin, Mark E and Khalimonchuk, Oleh and Schwertz, Hansjörg and Pereira, Renata O and Brahma, Manoja K and Tuinei, Joseph and Contreras-Ferrat, Ariel and others: Maintaining myocardial glucose utilization in diabetic cardiomyopathy accelerates mitochondrial dysfunction. In: Diabetes, 69, 2020, 2094--2111
2020Webb, William M and Irwin, Ashleigh B and Pepin, Mark E and Henderson, Benjamin W and Huang, Victoria and Butler, Anderson A and Herskowitz, Jeremy H and Wende, Adam R and Cash, Andrew E and Lubin, Farah D: The SETD6 methyltransferase plays an essential role in hippocampus-dependent memory formation. In: Biological psychiatry, 87, 2020, 577--587
2020Potter, Luke A and Pepin, Mark E and Ha, Chae-myeong and Bakshi, Sayan and Wende, Adam R: Transcriptomic Analysis of End-stage Human Heart Failure Highlights Strong Interaction Effect Between Race and Diabetes. In: Circulation Research, 127, 2020, A511--A511
2019Potter, Luke A and Pepin, Mark E and Wende, Adam R: A Novel Role of Cardiac DNA Methylation as a Regulator of Fibrosis in Human Diabetic Heart Failure. In: Circulation Research, 125, 2019, A945--A945
2019Pepin, Mark E and Ha, Chae-Myeong and Drakos, Stavros and Tristani-Firouzi, Martin and Selzman, Craig and Fang, James C and Wende, Adam R and Wever-Pinzon, Omar: A novel role of genome-wide DNA methylation as a regulator of cardiac gene expression in end-stage human heart failure. In: Circulation, 140, 2019, A10763--A10763
2019Pepin, Mark E and Drakos, Stavros and Ha, Chae-Myeong and Tristani-Firouzi, Martin and Selzman, Craig H and Fang, James C and Wende, Adam R and Wever-Pinzon, Omar: Chromatin and Epigenetics in Cardiovascular Disease: DNA methylation reprograms cardiac metabolic gene expression in end-stage human heart failure. In: American Journal of Physiology-Heart and Circulatory Physiology, 317, 2019, H674
2019Mark Emile Pepin, Stavros Drakos, Chae-Myeong Ha, Martin Tristani-Firouzi, Craig H Selzman, James C. Fang, Adam Raymond Wende, and Omar Wever-Pinzon: DNA Methylation Reprograms Cardiac Metabolic Gene Expression in End-Stage Human Heart Failure.. In: American Journal of Physiology - Heart and Circulatory Physiology, 2019,
2019Pepin, Mark E and Koentges, Christoph and Pfeil, Katharina and Gollmer, Johannes and Kersting, Sophia and Wiese, Sebastian and Hoffmann, Michael M and Odening, Katja E and Mühlen, Constantin von zur and Diehl, Philipp and others: Dysregulation of the mitochondrial proteome occurs in mice lacking adiponectin receptor 1. In: Frontiers in endocrinology, 10, 2019, 872
2019Mark E. Pepin, William M. Webb, Sushma Boppana, Alice N. Weaver, Randy L. Seay, Donald M. Dempsey, James H. Willig, William M. Geisler, Robin G. Lorenz: Gamification: an Innovative Approach to Reinforce Clinical Knowledge for MD-PhD Students During Their PhD Research Years. In: Medical Science Educator, 2019,
2019Pepin, Mark E and Ha, Chae-Myeong and Crossman, David K and Litovsky, Silvio H and Varambally, Sooryanarayana and Barchue, Joseph P and Pamboukian, Salpy V and Diakos, Nikolaos A and Drakos, Stavros G and Pogwizd, Steven M and others: Genome-wide DNA methylation encodes cardiac transcriptional reprogramming in human ischemic heart failure. In: Laboratory Investigation, 99, 2019, 371--386
2019Gollmer, J and Koentges, C and Pepin, M and Pfeil, K and Wende, AR and Bode, C and Zirlik, A and Bugger, H: P3480 Tissue-specific regulation of the mitochondrial proteome by adiponectin receptor 1. In: European Heart Journal, 40, 2019, ehz745--0350
2019Pepin, Mark E and Bickerton, Hayden H and Bethea, Maigen and Hunter, Chad S and Wende, Adam R and Banerjee, Ronadip R: Prolactin receptor signaling regulates a pregnancy-specific transcriptional program in mouse islets. In: Endocrinology, 160, 2019, 1150--1163
2019: Resident macrophages reprogram toward a developmental state after acute kidney injury. In: JCI Insight, 2019,
2019Pepin, Mark and Wende, Adam and Banerjee, Ronadip: SAT-163 Prolactin Receptor Signaling Regulates a Pregnancy-Specific Transcriptional Program in Mouse Islets. In: Journal of the Endocrine Society, 3, 2019, SAT--163
2019Gollmer, J and Koentges, C and Pepin, M and Pfeil, K and Wende, AR and Bode, C and Zirlik, A and Bugger, H: Tissue-specific regulation of the mitochondrial proteome by adiponectin receptor 1. EUROPEAN HEART JOURNAL. 2019. 2096--2096
2018Pepin, Mark E and Padgett, Lindsey E and McDowell, Ruth E and Burg, Ashley R and Brahma, Manoja K and Holleman, Cassie and Kim, Teayoun and Crossman, David and Kutsch, Olaf and Hubert, M Tse and others: Antiretroviral therapy potentiates high-fat diet induced obesity and glucose intolerance. In: Molecular metabolism, 12, 2018, 48--61
2018Ba{\~n}os, James H and Pepin, Mark E and Van Wagoner, Nicholas: Class-wide access to a commercial step 1 question bank during preclinical organ-based modules: a pilot project. In: Academic Medicine, 93, 2018, 486--490
2018Koentges, Christoph and Pepin, Mark E and Müsse, Carolyn and Pfeil, Katharina and Alvarez, Sonia V Viteri and Hoppe, Natalie and Hoffmann, Michael M and Odening, Katja E and Sossalla, Samuel and Zirlik, Andreas and others: Gene expression analysis to identify mechanisms underlying heart failure susceptibility in mice and humans. In: Basic research in cardiology, 113, 2018, 1--17
2018Kim, Teayoun and Nason, Shelly and Holleman, Cassie and Pepin, Mark and Wilson, Landon and Berryhill, Taylor F and Wende, Adam R and Steele, Chad and Young, Martin E and Barnes, Stephen and others: Glucagon receptor signaling regulates energy metabolism via hepatic farnesoid X receptor and fibroblast growth factor 21. In: Diabetes, 67, 2018, 1773--1782
2018Quiles, Justin M and Pepin, Mark E and Cinghu, Senthilkumar and Challa, Anil Kumar and Wende, Adam R and Crossman, David and Namakkal-Soorappan, Rajasekaran: Nrf2-Dependent Transcriptional and Post-Transcriptional Regulatory Responses in Reductive Stress Myocardium. In: Circulation Research, 123, 2018, A234--A234
2017Wende, Adam R and Kim, Jaetaek and Holland, William L and Wayment, Benjamin E and O’Neill, Brian T and Tuinei, Joseph and Brahma, Manoja K and Pepin, Mark E and McCrory, Mark A and Luptak, Ivan and others: Glucose transporter 4-deficient hearts develop maladaptive hypertrophy in response to physiological or pathological stresses. In: American Journal of Physiology-Heart and Circulatory Physiology, 313, 2017, H1098--H1108
2017Pepin, Mark E and Crossman, David K and Barchue, Joseph P and Pamboukian, Salpy V and Pogwizd, Steven M and Wende, Adam R: Glucose-Mediated Remodeling of Cardiac DNA Methylation. In: Circulation Research, 121, 2017, A15--A15
2017Brahma, Manoja K and Pepin, Mark E and Wende, Adam R: My sweetheart is broken: role of glucose in diabetic cardiomyopathy. In: Diabetes \& metabolism journal, 41, 2017, 1--9
2016Pepin, Mark E and Wende, Adam R: Diabetes and Glucose Alone Regulate Cardiac ABAT Levels. In: The FASEB Journal, 30, 2016, 1273--9
2016Brahma, Manoja K and McCrory, Mark A and Paterson, Andrew J and Pepin, Mark E and Young, Martin E and Wende, Adam R: Regulation of Myocardial Ketone Oxidative Proteins by Increased O-GlcNAcylation. In: The FASEB Journal, 30, 2016, 1273--1
2013MacKenzie, Matthew G and Hamilton, David Lee and Pepin, Mark and Patton, Amy and Baar, Keith: Inhibition of myostatin signaling through Notch activation following acute resistance exercise. In: PloS one, 8, 2013, e68743
2012Kelly, Jesse C and Pepin, Mark and Huber, Dale L and Bunker, Bruce C and Roberts, Mark E: Reversible Control of Electrochemical Properties Using Thermally-Responsive Polymer Electrolytes. In: Advanced Materials, 24, 2012, 886--889
n.n.Lennermann, David C and Pepin, Mark E and Grosch, Markus and Konrad, Laura and Kemmling, Elena and Hartmann, Joshua and Nolte, Janica L and Clauder-Münster, Sandra and Kayvanpour, Elham and Sedaghat, Farbod: Deep phenotyping of two pre-clinical mouse models and a cohort of RBM20 mutation. n.n.,
n.n.Weaver, MD and Seay, Randy L and Dempsey, Donald M and Willig, James H and Geisler, William M and Lorenz, Robin G: Gamification: An Innovative Approach to Reinforce Clinical Knowledge for MD-PhD Students During Their PhD Research Years. n.n.,
n.n.Wende, Adam R and Kim, Jaetaek and Holland, William L and Wayment, Benjamin E and O’Neill, Brian T and Tuinei, Joseph and Brahma, Manoja K and Pepin, Mark E and McCrory, Mark A and Luptak, Ivan and others: Glucose transporter 4 (GLUT4) deficient hearts develop maladaptive hypertrophy in response to physiologic or pathologic stresses 2. n.n.,
n.n.Webb, Fern J and Irwin, Ashleigh B and Pepin, Mark E and Henderson, Benjamin W and Huang, Victoria and Butler, Anderson A and Herskowitz, Jeremy H and Wende, Adam R and Cash, Andrew E and Lubin, Farah D: Open Library of Bioscience. n.n.,